Most of our software and other tools can be found on the sella lab GitHub.
The software and documentation for jointly inferring parameters of sweeps and background selection and building maps of the effects of linked selection (described in Elyashiv et al. (2016)) can be found here.
Life history effects on diversity levels of X and autosomes
The software and data used in Amster & Sella (2019) and Amster et al. (2019) can be found here. Also includes a tool extending coalescent simulations in ms to incorporate the effects of past changes in life-history and mutation rates, as described in the SI to Amster & Sella (2019).